PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0045s0710.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 225aa    MW: 25051.9 Da    PI: 6.2786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0045s0710.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31e-1452101255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                              ++G r +   ++Wv+e r+p   +k+ r++lg++ tae+Aa+a++ a+++l+g
  SapurV1A.0045s0710.1.p  52 VFRGTRKRN-GNKWVCEMREP---NKKSRIWLGTYPTAEMAARAHDVAALALRG 101
                             678888666.89*****9998...347*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-1052101IPR001471AP2/ERF domain
SMARTSM003802.6E-2552115IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-1952111IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-2852111IPR001471AP2/ERF domain
PROSITE profilePS5103220.95652109IPR001471AP2/ERF domain
PRINTSPR003676.6E-75364IPR001471AP2/ERF domain
CDDcd000181.77E-2653111No hitNo description
PRINTSPR003676.6E-77591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MSTDRQEPSP SNSDSSNYSR VTVQSDEEVL LATSCPKKRA GRRIFKETRH PVFRGTRKRN  60
GNKWVCEMRE PNKKSRIWLG TYPTAEMAAR AHDVAALALR GKSACLNFAD SAWRLPVPVS  120
NDAKDIRTAA NEAAELFRPQ EFGGCQASHQ NSSAVPKDCS SEVCNDGRGT FQENDVFFEE  180
AMLDMPGLLV DMAAGLLLPP PYYVRNDSFD RDSENDSYVS LWSY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011014145.11e-117PREDICTED: dehydration-responsive element-binding protein 1E-like
RefseqXP_011029176.11e-117PREDICTED: dehydration-responsive element-binding protein 1E-like
SwissprotQ9SYS67e-69DRE1C_ARATH; Dehydration-responsive element-binding protein 1C
TrEMBLA0A0N6ZD591e-119A0A0N6ZD59_9R
STRINGPOPTR_0001s08710.11e-105(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-59C-repeat/DRE binding factor 2